YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|150015301, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREVVIVSAV RTALGSFGGA LKDVSAVDLG ALVIKEAVNR AGVKPELIEE VIMGNVIQAG  60
   61 LGQNTARQST IKAGLPQEVS AMTINKVCGS GLRAVSLAAQ MIKAGDADVV VAGGMENMSA 120
  121 APYALDKARW GQRMGDGKLV DTMIKDALWD AFNNYHMGVT AENIAKQWGL TREEQDAFSA 180
  181 ASQQKAEAAI KSGRFKDEIV PVVIPQRKGE PKVFDTDEFP RFGTTAETLA KLKPAFIKDG 240
  241 TVTAGNASGI NDGAAAFVVM SAEKAEELGL KPMAKILSYG SKGLDPAIMG YGPFHATKKA 300
  301 LEKANLTVED LDLIEANEAF AAQSLAVAKD LKFDMSKVNV NGGAIALGHP VGASGARILV 360
  361 TLLHEMEKRD AKKGLATLCI GGGMGTALIV ERI

Type	Start	End	Confidence
Signal Peptide	1	15	0.54
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	393	0.94