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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91801860, gi|...
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.17
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNANMRNFAL WVIIVLLLLA LFTLFQNPGH QKTAQDISFS QLLTDVDQNN VRDVVIQGQD  60
   61 IHGTFTNGSS FQTYAPADPG LVKKLYDAKV QITAKPPGES VPWFVSLLVS WLPFIALIGV 120
  121 WIFLSRQMQG GAGKAMGFGK SRAKMLTEAH GRVTFEDVAG VDEAKQDLQE IVEFLRDPSK 180
  181 FQRLGGRIPR GVLLVGPPGT GKTLIARAVA GEANVPFFTI SGSDFVEMFV GVGASRVRDM 240
  241 FEQAKKNSPC IIFIDEIDAV GRHRGAGLGG GNDEREQTLN QLLVEMDGFE ANEGVILIAA 300
  301 TNRPDVLDPA LLRPGRFDRQ VVVPNPDVVG REQILKVHVR KVPLAPDVNL KTVARGTPGF 360
  361 SGADLMNLVN EAALTAARRN KRMVTQAEFE EAKDKVMMGA ERKSLVMTEE EKMLTAYHEG 420
  421 GHAIVGLNVV ATDPIHKATI IPRGRALGMV MQLPERDKLS MSREQMTSRL AIMMGGRVAE 480
  481 EMIFGREKVT SGASSDIEQA TRLARMMVTR WGLSEELGTV SYGENQDEVF LGMSVSRTQN 540
  541 ASEATVQKID KEIRRFVEEG YNEATRILTE KRADLEALAK GLLEFETLSG DEITDLLNGK 600
  601 KPNRESVLEP SGPRTSAVPP AGKPRPRPDP GLEPQPQA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle