YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|150016469, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKNTKKEKD DTERWMLSYL DFITLMMIFF LMMYAISNVD TKKSQTLANS LKIGFNSGNG  60
   61 ENVIAVSDSS NSPPTVIDQQ NTQNNSDSIA EEEKLSDVKK KVDDLVNDSE LKGSVTTSIQ 120
  121 ERGLIISFND SVFFNSGQST IKPDWQGKLI SISKILNDID NYIHVEGHTD NVAINNDYFH 180
  181 SNWQLSAVRA ANVVEFLISK GNVKPERLSS VGYGEYRPVK DNNTEDGRAA NRRVDIVILN 240
  241 TKFNNSEIPK E

Type	Start	End	Confidence
Cytoplasmic	1	16	0.93
Transmembrane Helix	17	36	0.96
Non-Cytoplasmic	37	251	0.99