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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|150019611, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKAFKIEG MTCSACANRV ERFVKKLEGV NSANVNFATE TLNVEFDENK LNNENIEATV  60
   61 VKAGYGVKKN MKTYTFKVEG MTCSACASRV ERVTKKLKGV QDSVVNLATE KLTINIDEDE 120
  121 IGYSEIKAAV DKAGYKLIKE EEQVEEKKKL EASQLLLRRF IISLIFAIPL LVITMGHMLG 180
  181 MPLPYIIDSM MNPLNFAVIQ LVLTIPVMIA GYKFYLVGIK NLFKLSPNMD SLIAISTLAA 240
  241 VLYGIFGIYK IQTGETEYAM HLYFESAAVI LTLITLGKYL EAVSKGRTSQ AIKALMGLAP 300
  301 KTATIIRNNA EITIPIEEVI VGDIVLVKPG EKVPVDGEII DGSTSIDESM LTGESIPVEK 360
  361 IVGSSVIGAS INKTGFIKYK ATKVGKDTAL AQIVRLVEEA QGSKAPIAKL ADVISAYFVP 420
  421 IVIMLAIIAS IGWLISGETT IFSLTIFIAV LVIACPCALG LATPTAIMVG TGKGAENGVL 480
  481 IKGGEALETT HSIKTIVFDK TGTITEGKPV VTDIITNGIS EDEILILAAS SEKGSEHPLG 540
  541 EAIVKEANDK NLELKEIQQF NAIPGHGIEV KIEEKNILLG NKKLMIEKNI DIAMFADESD 600
  601 RLAAEGKTPM YVAVDNTLSG IVAVADTVKP SSKKAIEALH NMGIKVAMIT GDNKKTADAI 660
  661 AKQVGIDIVL AEVLPEDKAN EVKKLQGENM KVAMVGDGIN DAPALAQSNV GIAIGSGTDV 720
  721 AIESADIVLM KSDLMDVITA IKLSKATIKN IKQNLFWAFG YNVLGIPVAM GILHVFGGPL 780
  781 LNPMIAAAAM SLSSVSVLTN ALRLKNFKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle