YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GLMU_NITHX
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGRSCLTIV LAAGEGTRMR SSLPKVLHPV AGQTLLAHVL TAAPSGPGTS LAAVVGPGHE  60
   61 AVADEARHVR PDVMTFVQHE RLGTAHAVLA AREAIARGAD DLVIAFGDTP LISADTLARM 120
  121 RAPLQAGASL VVLGFHAADP TGYGRLIVDN GRLTAIREQA DASADERSIT LCNAGVMAFD 180
  181 GKTALQIIEK IGNANSKGEY YLTDAVSIVR ESGLTAAVIE TSEDEVRGIN TKAQLAEAEQ 240
  241 VMQARLRKEA LDAGVTMVAP DTVFLAADTS FGKDVTIEPY VVIGPGVTIA DGAVIHSFSH 300
  301 LVQASIGRNA SVGPYARLRP GTSLGEGARV GNFVETKAAV LEAGAKVNHL TYVGDAHIGA 360
  361 NANIGAGTIT CNYDGFGKYR TEIGEGAFVG SNSSLVAPVK IGAGAYVGSG SVVTRNVPDD 420
  421 ALAVGRGQQT VREGWARRFR EMKLLAKKPK TG

Type	Start	End	Confidence
Signal Peptide	1	16	0.81
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	452	0.98