YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149905893, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVKKAIIPA AGLGTRFLPA TKAQPKEMLP VVDKPTIQYI VEEAIASGIE EILIITGRNK  60
   61 KSIEDHFDKS VELELELEKS GKSELLELVR DISDMVDIHY IRQKEPRGLG HAIHCAKTFV 120
  121 GNEPFAVLLG DDIVDSEKPC LKQLIDCYSE YKTTILGVQT VAKENVSKYG IVDGIHVEDR 180
  181 VYKVKDLVEK PNTEEAPSNV AILGRYIITP EIFNILENTK PGKGGEIQLT DALKTLIGTE 240
  241 AMYAYNFEGK RYDVGDKLGF LQATIEFALK KDELRDEFID YLSSKPWENN Y

Type	Start	End	Confidence
Signal Peptide	1	23	0.92
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	291	0.99