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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|65321697
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVCFSGAMY TTYVQGQNKP LGESYEATRG VIYNTPLING DRLSFQVEDQ NKNIVQLSYK  60
   61 MKSASEKKQM RQLHAGVSCI FDGERKEPQI ARNFHGFNYR DYLYKQNIHF ILEATYISEC 120
  121 RKTSLSLVQW ILLLRQQAIL GVTEMFPEQS GAFMNALLFG DRQQMTFEVE GQYQQFGLVH 180
  181 LLAISGSHIV LLMVIVYFIL LRSGVTREIA TVCLIFFIPI YMILAGASPS VIRASITGVL 240
  241 MLIAFMCSIR LSSLDALSIT AICMLIFDPY LVFNIGFQFS FVGSFALLLS APLLLESGNG 300
  301 VIRNSIYISL ISQLVSTPIL LYHFGYYSPY SIFLNILYVP FLSLIVLPCS IIILICLPII 360
  361 PFLAKSFANV LSIGLNLSND FLSYCESLPF TRLNFGQTPI LLVALYCVSI ISVLMVWERR 420
  421 ISKGMVFIFA GIFLFISTGH YVYPYFRESG SVTFLDVGQG DAILIRLPYD QEIYLIDTGG 480
  481 TIRLNKEEWQ RKKHEFSVGN DVLIPYLQKE GIKKIDKLIV THGDADHIGA AQELLSNITV 540
  541 KEVVFGRKEQ EAILEKAVKK QALEKEVKIS EVGEGESWRV NEAEFFVLAP TGKERSENNA 600
  601 SIVLWAKLGG ITWLFTGDLE EGEKGLVATY PDLRADVLKV AHHGSNTSSI TPFLSAVQPN 660
  661 IAIISVGERN RYGHPHKEGI ERFEKMAIEI WRTDKQGAIS YVFKEERGTF RSKITYDETR 720
  721 NR

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