YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|65319375
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFTSVRKLV LFIIATVLAT FFLISMMVTS MKETKSTYLY NWLNELSMNG YMYVLGKENH  60
   61 YFTQEYRNLN QDFSISSFLF SMATNIRFND VRSFVGKELP GFGKYDTEIV IAGEGTNYSN 120
  121 LPIESSVPLE EVVKERTGEG GQAPKPDTNK EKKQPAQTTG KRQVAFIYHS HSWESYLPLL 180
  181 NLTNDPNPNK ATSSVTNISI VGDRFREQLA NEGIGATNDK TDVGQKLISK GLNSNSSYKM 240
  241 SREIVQEAMT SNKELQYFFD LHRDSARKNV TTKAIGDKSY AKLAFVIGKG NKNYEKNLQL 300
  301 ATALHETINK KYPGVSRGVI QKGFQTGNGV YNQDLSGQAI LIEVGGVDNT EEELNRSIDV 360
  361 LAKAFGEYFW QAEKVNG

Type	Start	End	Confidence
Signal Peptide	1	30	0.67
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	377	0.99