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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|65317815
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLNISFILK GEMAMKSKKF TLLLLSLLLF LPLFLTNFIT PNVVLADSQK QDQKIVGYFP  60
   61 SWGIYGRNYQ VADIDASKLT HLNYAFADIC WNGKHGNPST HPDNPNKQTW NCKESGVPLQ 120
  121 NKEVPNGTLV LGEPWADVTK SYPGSGTTWE DCDKYARCGN FGELKRLKAK YPHLKTIISV 180
  181 GGWTWSNRFS DMAADEKTRK VFADSTVDFL REYGFDGVDL DWEYPGVETI PGGSYRPEDK 240
  241 QNFTLLLQDV RNALTKAGAE DGKQYLLTIA SGASQRYADH TELKKISQIL DWINIMTYDF 300
  301 HGGWEATSTH NAALYKDPND PAADTKFYVD GAIDIYTNEG VPADKLVLGV PFYGRGWKSC 360
  361 GKENNGQYQP CKPGSDGKLA SKGTWDDYST GDTGVYDYGD LAANYVNKNG FVRGWNDVAK 420
  421 VPYLYNATTG TFISYDDNES MKYKTDYIKT KGLSGAMFWE LSGDCRTSPK YSCSGPKLLD 480
  481 TLVKELLGGP ITQKDIEPPT NVKNIAVTNK NSNSVQLNWT ASTDNVGVTE YEITAGEEKW 540
  541 STTTNSIAIK NLKPNTEYTF SILAKDAAGN KSQPTSILVK TDDANTTPPG GNSNATFSVT 600
  601 SNWGSGYNFS IVIKNSGTTP IKNWKLEFDY NGNLTQVWDS KISSKINNHY VITNAGWNGE 660
  661 IPPGGSITIG GAGTGTPAEL VNASISEN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle