YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|65317173
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVMIKRVFQ YIILFLTITM YASPHAGATT IPPAEHHPNT ETTSSTKKIA YLTFDDGPNK  60
   61 YTTQILNILK EKNGKATFFV IGGKVPHYKK TMQRLIKDGH YIGLHSMSHD VKRLYTGDPS 120
  121 ALITEMEQTQ NIVQQVTELN THLVRVPYGS MPYLKKNYRD ALVSAQYKMW DWTIDTYDWK 180
  181 SYDNPSAILE RVRNQSDEQV EVILMHDSSV TVQILPQVID YLQSQGYKLL PYNPSSHLKV 240
  241 NFWKDTRL

Type	Start	End	Confidence
Signal Peptide	1	28	0.51
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	248	0.99