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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|150017029, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIFIINRIG NTVIGRKGSL RLLISVLFIT LMATTVGIIT YIIFNNWKSS VNNTIMKIED  60
   61 DSNQDVFNEI QSLFSIPLYN NEVNHTFIEN KVIDMHNKDQ RDAFFAGIVK YSSDEIYSFS 120
  121 FGTEDGKYYG ARKNGNDDIE IYRSTPETKG HSLYYNVDEN LKQGKFVNDY GDFDPRTRDW 180
  181 YISAKENGKP VFSSVYKHFT KDDLALSAAY PIYNKDGSIQ GVMGTHIVLS TLNESLEKIA 240
  241 NENSASIYIV EKNSGFLVAN SLNKTNFEIL SDGNINRTLV KNITDKSIND AYENYINTSN 300
  301 TSFISEVNNE NYHTKIFEYN KDGLDWLIIT SVPETIFTKE IRNNINIAIE LTVIALIIAV 360
  361 IIHIKSTKII LKPINHLIEI SDKFSKGNLS ERAKVFRNDE IGSLSKAFNS MAEELCSFIN 420
  421 NLEEKVKERT NELIIAKEAA EDANMAKSQF LANMSHEIRT PLNGIVGFLS ILEKTDLDST 480
  481 QQDYIETIQT SSETLLVVIN DILDISKIEA GRMEIEKVAF DIRSVIESTI FLYDAKAREK 540
  541 GLELNMLINS AIPSCLVGDP TKIRQIISNL VSNAVKFTHN GEVFIEVSVI KETNTEVQLY 600
  601 FEIRDTGIGM NEEEISKLFK PFSQADSSST RKYGGTGLGL AICKKIVEMM GGTISVKSVK 660
  661 NRGTTFCFDL LLDKSEQSVI QMPPDYSIFK GKRILVIDDY EMNRYIAKVY LEEVGCMIDE 720
  721 AESLESALSM LINNRKAYNT ILIDYQMKEI TGFELVEIMK ERGLINDIPL ILLTSVTANS 780
  781 EARIAKENKF SGYISKPYKR GDLLDCVAMV IKGDGSKIYN NDVFITKQNV EEAKYNKKIK 840
  841 ILLVEDNDIN IKFFVNSLKL NGLTCDIAID GAKALKACEN KEYDIIFMDC QMPVMDGYEA 900
  901 TRKILLLRSY KNVPVIAMTA YSMKDDEIKC LEAGMIDYLS KPFTVDQVME MLEKHVKNIH 960
  961 NDDMNILSDL NDHGFEMNQS DYFTEIVKSL IEESGFDERF CTELLEEFCE QSKKILSQIK1020
 1021 ECIDQNDLNE SCILLHKLKG SAGTVRVNDI AEFALQAENA AKNDDKDLLM KAVYSMEKTL1080
 1081 KNL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle