YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|150015730, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMKKTLESF NNAITGIIDT VRTERNMKIH LIVALVVLIA SFFFDITKYE FLILAVTITM  60
   61 VIAAELINTA IEATIDMTTN YYHPLAKIAK NAAAGAVLIT AINALLVGYI IFWDRLSRFS 120
  121 FSLINKVKNS EPYTILIVLV IVCIVTIIAK AIFGEGTPLK GGMPSGHSAL GFSIATAISL 180
  181 ITEEPICILL SFLLAFITAQ SRVDSEVHSI LEVIVGAIFG ILLTLFIFTL FRL

Type	Start	End	Confidence
Cytoplasmic	1	26	0.75
Transmembrane Helix	27	47	0.81
Non-Cytoplasmic	48	91	0.51
Transmembrane Helix	92	113	0.96
Cytoplasmic	114	132	0.67
Transmembrane Helix	133	154	0.94
Non-Cytoplasmic	155	171	0.64
Transmembrane Helix	172	197	0.87
Cytoplasmic	198	208	0.59
Transmembrane Helix	209	231	0.91
Non-Cytoplasmic	232	233	0.64