YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|120599314, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKVLCLKTP FLDWFKKIFG WILEGVIMDN NQCTIIKLSG SLAKKFGREH KRYLDTGTTT  60
   61 EAFSAIKNTL QGFEQFIKEQ AKLGLRYAIF RNGKNTGEDE FGLAGSREIR IVPVIGGSKR 120
  121 GGVLQTIIGA VLIVASFIPG LQMLMAPGIA LVAGGVVQML SPQAKGLKGR EASENAPSYA 180
  181 FGGAVNTTAA GNIVGIGYGK RRIGGAIISA GIYAEDIATT KRPIQSGGGN GGNGTQEP

Type	Start	End	Confidence
Cytoplasmic	1	122	0.95
Transmembrane Helix	123	153	0.76
Non-Cytoplasmic	154	178	0.61
Transmembrane Helix	179	199	0.62
Cytoplasmic	200	238	0.82