YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82719127, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLDLSQFND IDFENIGGWP NQVKTFFAIL LALCVFAAGY FLVIADAVDL YSAEQNKEVQ  60
   61 LRDDFKNKYQ LAANLKLYRE QLAIMEVQFA ELLKMLPSEN EMPGLLDDLT FVATDAGLRI 120
  121 KSLNWEPEIQ RDFYIEFPIK MSVTGDYHQL GNMVSGVAKL PRIVSLHDFT IKRDDLGNLA 180
  181 MDILAKTYRF KEGAELPPEK TSDNKGKK

Type	Start	End	Confidence
Cytoplasmic	1	24	0.47
Transmembrane Helix	25	48	0.83
Non-Cytoplasmic	49	208	0.52