YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|124510614, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METFYSLYPA VKHLHFTFIA LSVLFFTVRF VLHLRQSALM DKKFIKIAPH VIDTFLLLSG  60
   61 LTLCFMIKQY PFVDPWMTEK IGAVVAYIAL GVIAIKANRN KLFKVFAFLG AIGWLVYAAK 120
  121 LAHFKQAVLL G

Type	Start	End	Confidence
Non-Cytoplasmic	1	12	0.94
Transmembrane Helix	13	33	0.93
Cytoplasmic	34	49	0.87
Transmembrane Helix	50	69	0.91
Non-Cytoplasmic	70	75	0.80
Transmembrane Helix	76	95	0.89
Cytoplasmic	96	104	0.70
Transmembrane Helix	105	124	0.91
Non-Cytoplasmic	125	131	0.92