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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|69133935, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSFAPAAER GWGLLSQGDQ WRCRTISRVV GNRVSNCAQC NCGKLRLVAC RRGAIGPRKA  60
   61 SCVSRFAFHY EKLAVKAGGR KVFDDPRRLR LRRLRAALVI ALLMAGTWAY LFLDGALSWQ 120
  121 TAWQEVRGRW TQQEDVLRLS DDPLQLPEDL RLASLLPVRP TRPTCEAPSQ PFFAAMASPS 180
  181 AATIFGHVPS DTDWGQLSLN ESCNQLGVLV PDWLRLETTP EGPVVKIESE ESRAPLVDYR 240
  241 STSGHAPDLM PVLEVDTGSD KAGFLRNLST PETAQSVTSQ VLAQLRPLYA QGTCISIPGL 300
  301 ETADLDVLQP FFKTLTSSLR SEGHSPCLIL SGTSTAWQSR ETTALFDKVI LKLFLDPWVG 360
  361 TAPSPLATDA WFEKTAKAAL QEIGKDKLVI ALGTFAVEWV SGEPLPKVLP YAAAMEKIAA 420
  421 AGAELRFSEK TSGSLASYRD PEGRLNKIWM QDVASLINQL VILQQLEIPN SAVWSLGLED 480
  481 PGIWSVLQNR DLSHDALSAD LALVKLDSYV SYRGEGALLR LHRRQSPGIR QIGFDTETGR 540
  541 VVSQSYDLLP RPYALERYGK PAGRKVVLTF DDGPHPVFSE QILDILQETQ TPATFFVTGK 600
  601 SVMNAPEVLN RMIDEGHEIG AHTFSHPRMD QVSKTRATLE YAMLDKVVAG AAGRQLTLYR 660
  661 EPFQRSGGPV TADRVAALEI AWDRDMQVVG MDVVPHDWAG WSGREIADFA IEEVERGAGN 720
  721 VILLHDGGED RTASVEATRL IITELSAKGY EFTTVADLTG STRAALMPVT EGGYQTFDRV 780
  781 SFSLVAWGQD AIVILFWLAL GIGVVRSVAI LLLAVLNWRG HRTISLTTPK VAVIIPAHNE 840
  841 EKVIRSCIQS VRASDYKNLE IIVVDDGSSD NTLNEIFAFS HMREVRLISQ PNQGKWSALN 900
  901 RALMNTSAEI VVCIDADTQI EKSAIGHMVR HFDNPRIGAV AGKIIAGNKV NLLTRLQALE 960
  961 YTTAQNVERK AFDLINGMLV VPGALGAWRV AALRKAGHFS DETMTEDTDL TIEVNRAGYR1020
 1021 IAYEPLARGY TEVPERIGQL LKQRLRWSFG MFQSAWKHKK AMFEGRSVGL ISIPDMFIFG1080
 1081 YLFPLLAPIA DLFVAILLYQ MVSGGWDSGA VGAQNMQYLL AYLTLPALEF VIAAFALARD1140
 1141 KDESMWSLLL FPVQRVLYRP ILYYSVIRAI LRAITGRLFS WGAQKRLGRD YSLATSGT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle