YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|120598853, gi...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRTMLTDEY WSKLIRLMLK TGRVYDKPEH RNTFEGILYR MRVGCPWRDV PEAFGDWSAI  60
   61 YRRFNLWSKK GILMQLFAEL RQLADLEWEF IDGSIVKAHQ HATGARSEDK EAIGKSRGGN 120
  121 TTKIHMAVDS CGLPIDFIVT GGEVHDSKAA IELLKQLPDA EHVIADRGYD SEKIREQIRE 180
  181 KKGVPNIPRK RNSKIGNGDI DWCLYKYRHL VENVFARLKH YRSVATRYDK LARNYASTLA 240
  241 LACCLIWLPM WVG

Type	Start	End	Confidence
Cytoplasmic	1	230	0.85
Transmembrane Helix	231	251	0.82
Non-Cytoplasmic	252	253	0.86