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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|82719896, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIHKNQLSS NAEARVSLPI EGMTCASCVG RVEAALNKVE GVVNASVNLA TELADIHLKA  60
   61 PVDRLKLIEA IEKVGYEVPV TSVELSVQGM TCASCVGRVE KALLAVDGVK AATVNLATER 120
  121 ATIRGVAGID DLISAIQKVG YEARVIDTQN QVSNESEVRK DAEKALLKKD LVIATALALP 180
  181 VFVLEMGSHM IPRMQHWVMN TIGIQESWYV QFVLTLLVLV VPGRRFYMKG IPALTRLAPD 240
  241 MNSLVSVGTI AAFGYSVVAT FVPYLLPEGT VNVYYEAAAV IVALILLGRF MEARAKGRTS 300
  301 EAIKRLVGLQ AKEAHVLRNG VMNDIPVKDV VLGDIIEVRP GERIPVDGEV SEGTSFIDES 360
  361 MITGEPIPVE KIVGSGVVGG TVNQKGALRL RATAVGGQTM LSQIIRMVEQ AQGSKLPIQA 420
  421 VVDRVTLWFV PAVMLAALFT FLIWLVFGPS PALSFALVNA VAVLIIACPC AMGLATPTSI 480
  481 MVGTGRGAEM GILFRKGEAL QLLKDAKVVA VDKTGTLTEG RPVMTDLELA QGFERNEVLA 540
  541 KVAAVESRSE HPIARAIVES AEGDGILLPE LTEFDSITGM GVRATVEGSL VEVGADRFMR 600
  601 ELALEVTYFS RISERLGNEG KSPLYVAIDG RLAAIIAVAD PIKSSTPVAI KALHQLGLKV 660
  661 AMITGDNANT AQAIAKQLDI DEVVAEVLPE GKVEAVRRLQ ENYGKVAFVG DGINDAPALA 720
  721 VADIGLAIGT GTDIAVESAD VVLMSGNLQG VPNAIGLSKA TIGNIRQNLF WAFAYNAALI 780
  781 PVAAGLLYPA YGILLSPIFA AGAMALSSVF VLGNSLRLRR FQPPLVEDAE H

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle