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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|82742443, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNPFVNPLA IPVLGFCAYS GTGKTTLLKQ LIPELNQRGL RLAVIKHAHH NFDVDIPGKD  60
   61 SYEMRKAGAR QMLVASHVRW ALMTEDARDG DPELVHLLKQ IEADKVDIVL VEGFKKLALP 120
  121 KIELHRAAHG KPFIYTQDEN ILAIACCDDT QLPNDALPSE LRRLDLNNIS QIADFVMEYA 180
  181 QNWEAPLQYP ISAVDACAIG DNKNLSVSQG LAQILSHVSP VAEIEDIELD ALDNRVLASD 240
  241 SISPVDVPQQ TNSAMDGYAF VYQDPMPTTL KLVGEVLAGH QYSATLKVGE TVRIMTGATV 300
  301 PAGADTVQPR ELAKEVDGIV SFEGRILSGQ HVRLAGEDIA QGQVALAKAT RLSAAEQGLL 360
  361 ASLGLNHVSV YRRPTVAVFS TGDEVSQPGE VLKANCIYDS NRFTIKAMAK RLGCDVIDLG 420
  421 IIEDSEAALE ATLAKAADLA DVVISSGGVS VGDADYIKTV LARLGKIDFW RISMRPGRPL 480
  481 AFGKIGDSLF FGLPGNPVAV MVSFLQFVQP ALRKLAGEVN WQAQLFPAIS DETLRSRQGR 540
  541 TEFIRGIYQL GKDGRLHVSS TGNQGSGMLS SMVKGNCLII IGDDAEAVNA GETVFIQPFA 600
  601 DLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle