YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62514210, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVRKAVIPA AGLGTRFLPA TKALAKEMLP IVDKPTIQFI VEEAKASGIE DILIVEGKQK  60
   61 RSIEDHFDSA PELEQNLKEK HKDALLELVH STTDIGVNLF FVRQPYPRGL GDAVRLAKSF 120
  121 VGDEPFVVML GDDLMHDKVP LTKQLINEYD KTHASILAVK KVPHDEVSAY GVIDPEKEVS 180
  181 KGLFNVKKFV EKPAVADAPS DLAIIGRYLL TPEIFDILEN QKPGKGNEIQ LTDAIDTLNQ 240
  241 TQRVFAHEFN GDRYDVGNKF GYVKTNIEYG LTHPEVKDEL RAYILDLASK LQANKPVGKP 300
  301 ANKK

Type	Start	End	Confidence
Signal Peptide	1	25	0.90
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	304	0.99