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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|120600109, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFNKLAIAM GIACGIMLTG CNDNEDSTAP VPESQLQTFA PNGLLKANIR RTTYGVPHIQ  60
   61 ADNLESLGFG SGYAQAQDNL CVLADGFIKA NSQRSMYFGP HASLDFSTGL PTSEDNGNLI 120
  121 SDFAYKALKI REQAEAKWPN FSENSRALIQ GFTAGYNQYL VDVDAGKQTA EPFCNGQPWV 180
  181 KPIVPEDVVT YLFSIALLPG AANFLDLIFY ANPGDAEEYM PRIVGPAPSQ DQMAFVADMQ 240
  241 SRLLARVARI TTPETNPRDL GSNGWGLGKD KTENGKGMVL GNPHFPHTGN LRFWQSHITI 300
  301 PGHIDMMGGS LVGMPGPINI GFNKDLAWTH TFSTAEHFVM YNLELVSGDR MQYLFDGKPM 360
  361 PINKETVSIL VNAGPAGMLV AEKDIYTTAK GPMVEAPPAL APFGWNDGSA FMIQDANMGT 420
  421 MDPVDHWLAM NRATNKQEFQ QAFKDYDGVI FNNTMYADKE GNAFYIDDST VPGLSESAVV 480
  481 LLKTSPDIKA AKAQAGFTIL PGNTSLFSFD GPTPYERAPK LERSDFVQNS NDSFWSTNLN 540
  541 EPLTYFSPMY GAEAGQLSLR TRMGLRLMQD AAGADGKFSL EELEAAVLSN RSYLAELVLP 600
  601 DLIAQCDAQG STPVVVSASL SKDITSACAA LKAWNGKQDN DSKGGALLRE FAHLFNQTTM 660
  661 LTKGFDPANA ATTPNTLATD GSALVALARA SLNLEAAGFT LDAQLGDVQF VEKSLPDGTP 720
  721 SGARLPWPGS HNAEGGFNVF STSLSGDDTL IPQHKYAPVM DVVTGKALGS GLTAKGYQIR 780
  781 YGSSWMMAVS FTDEGPVARG ILTYSESSNI LTPEFADQSV LYSSTKSFRP LLFKEADIAP 840
  841 AVVSTMELTL QKPN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle