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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|82741663, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHRAFKKNI IAAIISSLGV SSAYAAVEAE STEPIEKITV YGEKIERSLK DTTSSVSVID  60
   61 KDSLDSGQYQ SVSDALSEIP NVVVLTGSVP DIRGVSGNGS ASGFNSFTGG ARARVSTLVD 120
  121 GVAEPFVADL TGDTGLWDIQ QVEVFRGPQS TINGRNSIGG TVFIKTEDPT FDWRGAARLG 180
  181 YRDQNNYVDS AVMVSGPILD DELAFRLSGQ NVTGETYNKG LVYETNPAPF DLNELITNRW 240
  241 RGKFLWQPSA VEELKVLYSF SYNDEKGDSG RNYFSGDDPW AYRPILQRYI ETESTTHSVK 300
  301 VDYDLGSGRA LDLVVAYMDY DWGSKSYEAL VTAQQYVDMK DESYTVDGKY SFGLNDRDFN 360
  361 GFIGLAYYER SQDFGSTGSS VYTGDDSSSS VSIYGELTYG LAESLWLTVG GRVMRDEQKR 420
  421 NFSMLYRGTQ LEEKLDNDST ITLPKLVLQY AITDNTTLAA SARRGYNSGG GALSLAESEY 480
  481 YYYDEEFVDT YELSARSMFL GGNVNLSANL FYNDFDGYQA SNQARKITNV DKAVTYGIET 540
  541 ELSAMLTANW QVIAGVGLLD SEIKKVDSSY GDIVGNQLNS APHVTANLGV KYWLNDAFSV 600
  601 GVSGNYVGEY FADIDNTESR IAGDYVVARL SVDYQKDNWR ISGFINNMFD EQAMTVNEPP 660
  661 SANYVNGYAA IIDPRNLGVS VMYSF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle