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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|82741660, gi|...
Protein type: Transmembrane
Type Confidence: 0.51
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLTRKSNIA LVADKPTLGI SRRQFMKQAG IATGGIAAAS LMGTGMMRRV EAKEVPHDAP  60
   61 IEVKRTICSA CAVGCGLYAE VQNGVWTGQE PAFDHPFNAG GHCAKGAALR EHGHGEKRLK 120
  121 YPMKLVDGKW KKISWEDAIN EVGDQMLNIR KESGPDSVYF MGSAKFSNEG CYMYRKLAAM 180
  181 WGTNNIDHSA RICHSTTVAG VANTWGYGAQ TNSFNDIQNA NAIFLIGANP AEAHPVSMQH 240
  241 ILIAKERNNA KIIVVDPRFS RTAAHSDLHC AIRPGTDIPF IYGMLWHIFE NGWEDKTFIK 300
  301 HRVFEMESIR AEVKKFPPKE VENITGVSEA DVYQAAKLMA DNRPGTVIWC MGGTQHHVGN 360
  361 ANTRAYCILQ LALGNMGVSG GGTNIFRGHD NVQGATDLGL LFDNLPGYYG LTSAAWSHWT 420
  421 HVWDLDMEWV KGRFDQTAYL GKDPMTTPGI PCSRWHDGVL EDKSKLAQKD NIRMAFFWGQ 480
  481 SVNTETRQRE VRDALDKMDT VVVVDPFPTM AGVMHRRKNG VYLLPAATQF ETQGSVSNSG 540
  541 RSIQWREQVI QPLFESKTDI EIMYRLAQKL GIDEQYTKRI AKENGLPVIE DITREINRGM 600
  601 WTIGMTGQSP ERIKLHTQNW GTFSNKTLEA AGGPAKGETY GLPWPCWGTP EAKHPGTQIL 660
  661 YNQAKHVKDG GGNFRARYGV EYNGQSILAD GTYSKGAEIK DGYPEFTADM LKQLGWWDDL 720
  721 TAEEKAEADG KNWKTDLSGG IVRVAIKHGC IPFGNAKARC IVWTFPDQVP VHREPLYTAR 780
  781 RDLVAKYPTY DDMQVHRLPT LYKSIQEKDL SGKYPLVLTS GRLVEYEGGG EESRSNPWLA 840
  841 ELQQEMFVEI NPADAADRGI RNGENVWLEG AEGGRIKVQA MVTPRVKPGV TFMPYHFAGV 900
  901 MHGESLAPNY PEGTVPYVIG ESCNTALTYG YDPVTQMQET KASLCQIVKA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle