YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82741322, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTNPRLFLH KISPHKGFTL IELVVGMLVI AIAIVMLSSM LFPQADRAAK TLHRVRSAEL  60
   61 AHSVMNEIWG KRYDQNTNAN GGVPACGSPL GMSCTPADKL GKDIVSGIVE SRNNFNDVDD 120
  121 YHGLNETATM LNSSQTYTEA YPNYRLSVTV AYGAVPNTKL VTINVTTPDN EVITYNMVRS 180
  181 NY

Type	Start	End	Confidence
Cytoplasmic	1	17	0.69
Transmembrane Helix	18	42	0.83
Non-Cytoplasmic	43	182	0.74