YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|120600390, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASQYAVNKK SARGFTLVEM VTVILILGIL VVGVSSFIIF GTRIFVESSS VDQVLSQSRF  60
   61 AVERMTRELR GALPNSVRVN TDSLTYQCIE FVPIQASTSY LSMPIAPSAA ALSGTVILDD 120
  121 VTSKIAVNQY AWIYPLTDSD VYNSARQKRA QINTMAPSGN RVTLTFTAPV RFAEASPRQR 180
  181 IYFGSNPVSY CFEKEPSANQ LQVRRYAGYA FTATQSKPGD MGSGVLMAQS VANLLSDSND 240
  241 LPMTLTPSSL VNHAMVHLQP RFNVNGETFQ YRHQVQVINV P

Type	Start	End	Confidence
Cytoplasmic	1	20	0.87
Transmembrane Helix	21	41	0.96
Non-Cytoplasmic	42	281	0.95