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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|82721328, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRFLMILNL ALRYQTHYMR GLLSNLLLIF FILTSSPTYA AIDCNSVFPG PIQSFSSSGE  60
   61 LYMQSGALIE NYNVLDVCFK TVKNYHEMNV SACGIGKCQI SGTASLARAA PTFVNSSTSA 120
  121 TNIVANWTTP SVELGTTAGY GQRFNSSRWD IGTLTINTGG NVTVSDAYST YVIKDLTFFN 180
  181 SSIMTLKAGK TYIIDGDLNL NSGTLNIVGT GDTKLYIKGN FTIALSSVFN APTSVDVYVG 240
  241 NRLEVQSNAQ IQGSYYVADD ATLLNSAVLV GRLSAKNVTL QSNSKVIYDA GAPVLQCFND 300
  301 DFSQSALSSD WVVSRSSGSF TPSIVGGRMR LTQASQKQST ASTYQRLFPA AENLVEIQFD 360
  361 HYAYGGATNN GADGIAVVLS DAAITPQPGA FGGPLGYGFK PGISGFAGGW LGVGIDEFGN 420
  421 FSGEGGSINL SGQRRQSVVV RGSGAGTSGY RYLRGTCNNG TTNTSGSCLS PTVDKNNVTP 480
  481 AHRYKITIDS QSAGQSLVKV ERNTGSGFVT LISSFNAAAQ TGQAIIPKDF LLSLTGSTGD 540
  541 YYNNHEIDNV QICALKSNPI TTQIDHFEFD HTGQGLTCNP ETVTIRACAN TSCSQLFTEP 600
  601 LTATLLPEST AEGVWVGGNQ VSFSGGTAQL QLRRNTAGVV TLGVKGSSPT TRPLSKTLCR 660
  661 IGAGALSENN CSLTFADSGF IFDVPDKLAN KPVEVLVKAV KKSDVTQQCI PSFQNQAKSL 720
  721 SFWSQYVEPS APITPKAVTI NSTAISAASA VPTALSLGFD INGQAKITVN YPDAGKLQIN 780
  781 AQYTGSGTEQ GLVMTGSDQF VSVPAGLCVK PVNATALCPS ANMSCNVYRK AGQTFGMTVQ 840
  841 AVAWQADNDS DFCSGNLPTP NFSDDSMMLA SKVVAPTIAS GANNGVLGVT SYSHSAQTNN 900
  901 LNTINNQTIS EVGVFQISAT ASANYLGTST SLNIPTAYSA NIGRFVPDRF LIGDISVLSA 960
  961 CGGFSYMDQP FPMSMSLTAL NIGGDRTYNY FPPFSLATAK LVGENNNNGI DLQSRLSALP1020
 1021 VNAASWVQGV ATIDGAYRAN LSRVTPNVAT NLYQDGPFEL LDIGVQLMDN DPRPNGLYSY1080
 1081 VASPDMDAAS TGACINCNAK KITTQILRHG RVVMDNTYGP ETEVLKMPTR AEYWNGTNWV1140
 1141 LNGDDSCTIA TYGLGSQVDN ADLGYHFDPN LATGQSVVRS GGTSTFQSGQ FELLWRAVAT1200
 1201 SGPALPRTSD RAFRCTRLAR MVLELERGFT Y

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle