YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190714069, gi...
Protein type:	Transmembrane
Type Confidence:	0.60
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADYIKDIRT KVGHAPLIMA GVIGILTDQA GRVLLQQRSD FTGEWGLISG TIEYGETPAQ  60
   61 TMVREFKEET NLEVEVVRLL GVNGNLTLTY PNGDVAQWLC PVFLVKQLSG VLNSDNSETE 120
  121 ALKFWDPAAA PDLFNQQHRE VLAHFIANET GYFD

Type	Start	End	Confidence
Cytoplasmic	1	11	0.53
Transmembrane Helix	12	31	0.56
Non-Cytoplasmic	32	154	0.96