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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|120559685, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCYQPKLGKL KTKVSLFVVG ILPSLPLLAS DVLGEPKVQP IEVIQVHGQQ YRRVMTVTKP  60
   61 GEAIISMDQI EEMQATTFAE VIDDMAGAHI DGGTRSGGER INVWGFGETE DFNVYVDNAP 120
  121 VGFEQYRYGS FFLDPDLIKR VEVIKGAHDV RSGNGGFGGA MYVVTKSADD FLKYDQSLGA 180
  181 RVKTSYASNN DAMGYTGTVY GRVNSSLSGL LHLTRRDAGD VTLANGEEYE YSGYEQNNYL 240
  241 GKMDYAQGDH QLALSVTHYL DEGRKPWANR RGPMPAISDY NIKKYGSYEQ ALYATTAYNT 300
  301 YEDNTWSANY RYSPSNPLID TQVVISHSAN ARHWVRPDIA WEKMTVSVGN FGHESWLDYK 360
  361 RDYIDINNLS LIGDHEITTG LQYRSLDRTS LVFNKSYEKN PEKNFGWYTP YYQPEGRQDT 420
  421 YAAYVRDAIH ITNDLTVTPS LRYDFIYSIG RPNIAPDYND IAAGHDYSST HHSGFSPRLG 480
  481 IDYQLTNHAR LNFDYAYSLQ APVVDEIYAV QYAKASITGT SRNIDVERLH AFKLGLMTQH 540
  541 QHVLANEDAL STQIALFANL GRDDIAQRRG AKSDKTHLIQ SGYTNLDGYH IYGADFEAQY 600
  601 RYQDVFSDLA VSWLQGKHNG SLRDSQDDDE YLANIAPLDI RLRLGMYITD DISIAWQGAW 660
  661 YDAQDHVPHG DIFNAESPSE NYFLQNVYFA YEPQAILKGL SVRLMVKNLT NQQVVPFLSD 720
  721 GIPAAGRDVR LSLAYEF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle