YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|148549501, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQQFQHDVL VIGSGAAGLS LALNLPSHLR VAVLSKGDLS NGSTFWAQGG VAAVLDNTDT  60
   61 VQSHVEDTLN AGGGLCHEDA VRFTVEHSRE AIQWLIEQGV PFTRDEHYSV DDGGFEFHLT 120
  121 REGGHSHRRI IHAADATGAA IFTTLLEQAR QRPNIQLLEQ RVAVDLITER RLGLPGERCL 180
  181 GAYVLDRNTG EVDTFGARFT VLATGGAAKV YLYTSNPDGA CGDGIAMAWR AGCRVANLEF 240
  241 NQFHPTCLYH PQAKSFLITE ALRGEGALLR LPNGERFMPR FDPREELAPR DIVARAIDHE 300
  301 MKRLGVDCVY LDITHKPADF IKSHFPTVYE RCLAFGIDIT RQPIPVVPAA HYTCGGVMVD 360
  361 DCGHTDVPGL YAIGETSFTG LHGANRMASN SLLECFVYGR AAAADIQAHL EQVDMPKALP 420
  421 GWDASQVTDS DEDVIIAHNW DELRRFMWDY VGIVRTSKRL QRAQHRIRLL LDEIDEFYSN 480
  481 YKVSRDLIEL RNLAQVAELM ILSAMQRKES RGLHYTLDYP GMLDEAKDTI LSPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle