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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|82739705, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDLANSNMT QNSQPVRIDF NTPELQRKRR MRALKDRLTR WYVLVGGLAV LAAITLIFFY  60
   61 LAYVVLPLFQ GAELTSKKAL EPTWLQQDAG KPLMIALEEQ NQVGMRVSDK GQALFFDTKT 120
  121 GNELKRVELP VPADTQVTSI STDQPGSALV VLGLSNGQAL VFQHTYKITY PDNKKTITPG 180
  181 IDYPYGEQSF VLDEQGRALD HVSVNVNGDT LLLAGSTGAH LQVVELTRTE NMMTEEVTTE 240
  241 QNRIELPQMT ETVKNIFIDP RQHWLYVING RATADVFSLR DKSLNGRYKL SDSADTEITA 300
  301 TAQLVGGISL IIGDSKGGLA QWFMARDPDG ESRFKQIRTF QMGKAPIVQI DAEERRKGFI 360
  361 ALDAEGKLGV FHSTAHRTLL VEPAAEGPGT LALSPRANRI IIEEGGKLLP LSLRNPHPEI 420
  421 SFSALWGKVW YENYDEPKYV WQSTASNTDF EPKLSLSPLT FGTLKAAFYA MILAAPLAIA 480
  481 AAIYTAYFMA PRMRRKVKPV IELMEAMPTV ILGFFAGLFL APYLEGHLPG VFSLFLLMPI 540
  541 GILLAGFFWS RLPESIRLRV PDGWEAAILI PVILFTGWFA LTMSPHLESW FFGGDMRLWI 600
  601 TNDLGITYDQ RNALVVGIAM GFAVIPNIYS IAEDAVFSVP RSLTLGSLAL GATPWQTLTR 660
  661 VVILTASPGI FSALMIGLGR AVGETMIVLM ATGNTPVMEM NLFEGMRTLA ANVAVEMPES 720
  721 EVGGSHYRVL FLAALVLLMF TFIMNTLAEL IRQRLRKKYS SL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle