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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|148549749, gi...
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRTRNSRTP QKRPTGRSRA WLGWALKLSL VGLVIVAGFA VYLDAVVQEK FSGKRWTIPA  60
   61 KVYARPLELF TGQKLSKNDF LTELDALGYR RENAANGPGA ASVSGNTVDL NTRGFQFYEG 120
  121 MEPAQFVRVR FSGDYVAGLS GANGKALDVV RLEPLMIGGI YPKNLEDRIL IKIDQVPKYL 180
  181 LETLVATEDR EFYSHFGVSP KSIVRAMWVN TSSGSMRQGG STLTQQLVKN FYLSSERSLS 240
  241 RKLTEAMMAV LLELHYDKRE ILEAYLNEVF VGQDGQRAVH GFGLASQFFF SQPLSELKLH 300
  301 QIALLVGMVK GPSYYNPRRH PERALARRNL VLDLVAEQGV ASQAEVDAAK KMPLGVTKRG 360
  361 SLADSSFPAF LDLVKRQLRQ DYRDEDLTEE GLRIFTSFDP ILQMKAETSM SETFKRLAGR 420
  421 KGADDVEAAM VVTNPETGEV QALIGSRQAG FAGFNRAIDA VRPIGSLVKP SVYLTALEQP 480
  481 SKYTLTSWVQ DEPFSVKGAD GQVWRPQNYD RRPHGTIYLY QGLANSYNLS TAKLGLEVGV 540
  541 PNVIKTIGRL GVNVDWPAFP AMLLGAGGMS PMQVATMYQT IANGGFNTPM RGIRSVLTAE 600
  601 GEPLKRYPFQ IQQTFDPGAI YLVQNAMQRV MREGTGRSVY NTLPRSLTLA GKTGTSNDSR 660
  661 DSWFSGFSQD LLAVVWMGRD DNGKTPFTGA TGALQVWTSF MKKADPLPLD MPQPDNVVQA 720
  721 WIDPYSGHGS DASCPGAVQM PYIRGSEPPA GATCGGEQDP VESVMDWVKG WMN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle