YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148546738, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDNRAVTAK LSRVDKAAIL LLSLGETDAA QVLRHMGPKE VQRVGVAMAQ MGNVHRDQVE  60
   61 QVMSEFVDIV GDQTSLGVGS DAYIRKMLNQ ALGEDKANGL VDRILLGGNT SGLDSLKWME 120
  121 PRAVADVIRY EHPQIQVIVV AYLDPDQAGE VLSNFDHKVR LDIVLRLSSL NTVQPAALKE 180
  181 LNQILEKQFS GNSNAARTTL GGIKRVADIM NFLDSSVEGA LMDAIREIDS DLSEQIEDLM 240
  241 FVFNNLADVD DRGIQALLRE VSSDVLVVSL KGADERVKDK IFKNMSKRAS ELLRDDLEAK 300
  301 GPVRVSDVET AQKEILTIAR RMAEAGEIVL GGKGAEEMI

Type	Start	End	Confidence
Signal Peptide	1	29	0.92
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	339	0.99