YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116511927, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSHDKDVKL FKKNDFHKGK TPVQKDRARW KNRNLLSSLE FALTGIWTAF KEERNMRKHA  60
   61 LAAVLAIVFG FIFQISEFEW LFLLLSIFLV FMAELFNSAI ENVVDLASDY QFYMRAKRAK 120
  121 DMAAGAVLVI SGFALIVGLF VFLPKIWTLF F

Type	Start	End	Confidence
Cytoplasmic	1	58	0.95
Transmembrane Helix	59	75	0.95
Non-Cytoplasmic	76	80	0.75
Transmembrane Helix	81	104	0.83
Cytoplasmic	105	121	0.91
Transmembrane Helix	122	143	0.93
Non-Cytoplasmic	144	151	0.77