YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82714721, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAIISGNAF KLLTCLAVGV ALASCSSNRP APKSSGNVVR SQPGLDINRA HKDGAPWWDV  60
   61 DVNKIPDATP TVHTGNYKAN PYTVLGKTYY PMQDSRNYRA EGTASWYGTK FHGQNTANGE 120
  121 LYDLYGMSAA HKTLPLPAYV KVTNLANNRS VILRVNDRGP FYSDRIIDLS YAAAKKLGYA 180
  181 EIGTAHVRVE GIDPQQWWAQ RGQTPPMVLK EPQVAQTQAI PASTGRVEQW TPPPQQHAAP 240
  241 VVPVQVGGNN VPGGSGGSFL QVGAFANPDA AELLRAKLST MVNAPVFISS IVRNQQTLHR 300
  301 VRLGPIGSQG EIQQAQDSIR LANLGQAKLV TAD

Type	Start	End	Confidence
Signal Peptide	1	27	0.97
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	333	0.99