YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82735991, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASRRNNGW VIWLTFAIGL LLSVSPMPQF MEVFRPMWLA LLVSFWTLAV PNKVGMTTAF  60
   61 VLGLAEDVLY GTLLGQNALV LTLITFLVLS LQQRLRMFPM WQQSLVILVI FGIAQLIQLW 120
  121 LSALTGNRLP TLALVWSAVI SALLWPWISF ALRDLRRRLH IN

Type	Start	End	Confidence
Cytoplasmic	1	8	0.70
Transmembrane Helix	9	30	0.90
Non-Cytoplasmic	31	68	0.71
Transmembrane Helix	69	91	0.87
Cytoplasmic	92	100	0.84
Transmembrane Helix	101	122	0.88
Non-Cytoplasmic	123	131	0.72
Transmembrane Helix	132	151	0.94
Cytoplasmic	152	162	0.91