YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82717356, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLLSALLI LTALGLQSGC SLREPMSAEQ DSETPTLTPR ASTYYDLINM PRPKGRLMAV  60
   61 VYGFRDQTGQ YKPTPASSFS TSVTQGAASM LMDALSASGW FVVLEREGLQ NLLTERKIIR 120
  121 ASQKKPDVAE NIMGELPPLQ AANLMLEGGI IAYDTNVRSG GEGARYLGID ISREYRVDQV 180
  181 TVNLRAVDVR TGQVLANVMT SKTIYSVGRS AGVFKFIEFK KLLEAEVGYT TNEPAQLCVL 240
  241 SAIESAVGHL LAQGIERRLW QVAGDPADGK ATVDKFLSQN QQP

Type	Start	End	Confidence
Signal Peptide	1	21	0.96
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	283	0.99