YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	tr\|I7B9T7\|I7B9T7...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATPADTPTP SVSPEPSRKR KAWLLGLLLL LILAGVGTWA WYSIVGRWHE STDDAYVNGN  60
   61 VVEITPLVAG TVISIGADDG DLVHAGQVLL QFDPADSEVA LQSAEAKLAR SVRQVRGLYS 120
  121 NVDSLKAQLE TRQAELRKAQ QDFNRRKVLA DSGAIAAEEL SHARDDLSVA QAAVNSARQQ 180
  181 LSTSSALVDD TVVSSHPDVM AAAADLRQAY LDHARTTLVA PVTGYVAKRT VQLGQRLQPG 240
  241 TATMAVIPLD QVWIDANFKE TQLREMRIGQ PVEITADVYG SEVKYSGTVD SLGAGTGSAF 300
  301 ALLPAQNATG NWIKIVQRVP VRIHLSPDQL KDHPLRIGLS TVVEVDLHDQ SGPTLAQQPP 360
  361 QKASYTTQVY DHQMIEADNL IARLIHENSA TGKTAQR

Type	Start	End	Confidence
Signal Peptide	1	40	0.75
N-region	1	31
H-region	32	37
C-region	38	40
Cleavage Site	40	41
Non-Cytoplasmic	41	397	0.99