YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FABH_CALS8
Protein type:	Transmembrane
Type Confidence:	0.55
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQNVKILST GRYVPDRVLT NYDLEKMVDT SDEWITQRTG IKERRIVDGT TSTTDLAVRA  60
   61 AKNAMDKAGI LPDDIDLVIV ATVTPEMFFP STACLVQKEL KLKNAFAFDI SAACSGFIYA 120
  121 MAIATHFIQN GFCKNALVIG AEALSRITNW SDRSTCVLFG DGAGAAILSS SDEQGILGFE 180
  181 LGSDGENGLL LYCHAFGLSD VTYSQVKENP NFRKIYMEGN EVYKFAVKIM PYAVEKVLEK 240
  241 VGLSSSDIDV FIPHQANIRI IESAAKRLKI PMEKVFVNLH KYGNTSAASI PIALDEAVEE 300
  301 GRIKKGDKVV LVGFGGGLTW ASTVIKWV

Type	Start	End	Confidence
Cytoplasmic	1	104	0.51
Transmembrane Helix	105	123	0.47
Non-Cytoplasmic	124	328	0.90