YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|146297376, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVLKQIFIS IAEYLSQFGY LGIFIGMTLE SACIPIPSEI ILPLGGYLVY KGIGNIFSMS  60
   61 LVATLGGYAG SVIAYLIGYY GGRPFILKYG KYFFISKHDF ERAEKFFHKR GEITIFISRL 120
  121 LPVIRTFISL PAGIARMNFV KFSVYTILGS FPWSLVFVYL GKKLGDNWRT IEEHLKGLDY 180
  181 FILAVLIIAI LGYVIIKLTR SKKRVDIE

Type	Start	End	Confidence
Cytoplasmic	1	17	0.84
Transmembrane Helix	18	38	0.88
Non-Cytoplasmic	39	55	0.78
Transmembrane Helix	56	79	0.87
Cytoplasmic	80	138	0.79
Transmembrane Helix	139	161	0.79
Non-Cytoplasmic	162	176	0.75
Transmembrane Helix	177	196	0.92
Cytoplasmic	197	208	0.68