YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82401615, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRYSQRALSI SASPTLAIDA LAKRLKESGE DVIGFGAGEP DFDTPENVKY AAIAAIVKGY  60
   61 TKYTPVAGIA CLKEAVAKYY NDNYGISYSA DEIVISNGAK HSLMNVFFAL LNEGDEVLLP 120
  121 SPYWVTYPEL IKLAGGKVVV VPTTKESNYK VNSRDLQKYI TSKTKAFVLN SPSNPSGMVY 180
  181 TYEELKEIVE LCIQNDIFII SDEIYDKLVY DGQKHISPAS FGEKAKELTI IVNGVSKSYA 240
  241 MTGWRIGYTL SNRELAKIMT NLQSHTTSNP NSIAQYAAYE ALSGPQENLK KMVEEFAKRR 300
  301 DLIYELVNEI EGLSSVKPQG AFYIWVDLSG VIGKSFDGKV IDSATTFAKL LLENEKVAVV 360
  361 PSEGFGMENH MRLSYATSVQ NIKEGLVRIK RFVEKLK

Type	Start	End	Confidence
Signal Peptide	1	22	0.95
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	397	0.99