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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|145408869, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERKILDVMG MSCASCARAI EKSVSKVEGV SSASVNFATE KLVVEYDETK TNLEKIKEAV  60
   61 KKAGYDVKDI PDDTAKDVII PIGGMSCASC ARAIEKSISK LPGIKEVSVN FATEKARVVY 120
  121 DPSKVRLSEI KEAIKKAGYT PLEVEETTAA ESQSDHKKLE EQYWFKRFVI SAIFAVPVLY 180
  181 IAMGNIIGLP LPQIIDPAKN PFNFVFIQLI LSIPIFIAGI RFYTVGFSRL IQRHPNMDSL 240
  241 IAIGTAAAYI YGIYGIFKIA AGDTSFVEES YFETAGVIIT LILLGRYFEV VSKGRASDAI 300
  301 KKLMGLAPKT ATILRDGQET VIPIEEIEVG DILIIKPGEK IPTDGEVIDG RTSVDESMLT 360
  361 GESIPVEKTV GSPVYGGTIN KNGTIKVRAT KVGKDTVLSQ IIKLIEEAQA SKPPIARLAD 420
  421 IISGYFVPAV IAIAIISGTL WYVWGKPGSF ALKVFITVLI IACPCALGLA TPTAVMVATG 480
  481 KGAEFGVLFK SGEALETLHK IDTIVFDKTG TITEGKPKVT DIITAEGFDE LEVLRLAASA 540
  541 EKTSEHPLAE AIVNYAKEKN LDLVDAQEFE AIPGFGIEAT VDGKNILLGN RRLMEQRNVS 600
  601 IWLTDEVQRL SQEGKTAMFI AIDGKFAGII AVADVIKPTS KKAIEILHKM GINTVMLTGD 660
  661 NRQTALAIAK QVGIDKVIAE VLPQNKAEEV KKLQTEGKKV VMVGDGINDA PALTQADVGI 720
  721 AIGSGTDVAI ESADVVLMKS DIMDVVTAID LSKKAIRNIK QNLFWAFFYN TAGIPIAAGV 780
  781 LHIFGGPLLN PVIAALAMAF SSVSVVTNAL RLRRYRPAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle