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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|82499504, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEDKGTQQR SVHGIRPRRG MGHGPRGFVP GEKAKDFKGT MKKLIRYLST YKISLITVLV  60
   61 LAILSTSFSI AGPKILSKAI TKIFEGIMNR ITGQGSGIDF EYIGKILIIL LVLYGLSSIF 120
  121 GYLQGWIMSG VSMKITYRFR KEISEKINRL PLKYFESTNQ GEILSRITND VDTITQTLNQ 180
  181 SMTQIITSVT MVLGVLVMMI SINWLMTLVA LLIIPASSII IAFIIKYSQK YFRQQQDYLG 240
  241 HLNGHIEEMY GGHHIVKAFN GEKKSIEKFD SLNNTLYNAA WKSQFLTGVM MPLMNVIGNL 300
  301 GYVVVTILGS WLVIKNAIEI GDIQAFIQYI RSFTQPIAQI ANISNILQQT AACAERVFEF 360
  361 LEEEEEVPDT PKQINLEDIK GEIEFRNVRF GYKPDKIVIN NFSAKIRAGQ KVAIVGPTGA 420
  421 GKTTIVKLLM RFYDVNDGAI LIDGHDIREF SRKDLRSLFG MVLQDTWLYN GTIKENIKYG 480
  481 KPDSTDEEVI RAAKLAHIDH FIRTLPQGYD TVLNEETTNI SQGQKQLLTI ARAILKNPKI 540
  541 LILDEATSSV DTLTEIQIQK AMDNLMKGRT SFIIAHRLST IRDADLILVM DHGDIVEQGT 600
  601 HQELLKKGGF YAKLYYSQFE KEEMAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle