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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|82403753, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLVTTLVIA AMVSSGVSAA ESKPATQATI DANNSVKQSL PFSDKKDFEN AQKGLIAKQD  60
   61 VVTIKNEQGD VVWDLEQYKK YIDLNNPAPD SVNPSLWRNA QLNMINGLFE VTDGIYQVRG 120
  121 YDLSNITFIK GKTGWIVFDP LISQETAKAA LDFVNEKLGK RPVVAVVYSH SHIDHFGGVR 180
  181 GIVDEKDVKA GKVKIIASHG FTEHAVSENV IAGNAMGRRA IFMYGALLPR NEFGGVNGGL 240
  241 GQTTSTGLAT LIEPTDIIEK TGDEMTVDGV KMVFQYTPGT EAPTEMNTWF PDKKALWMAE 300
  301 NSTNTMHNIL TLRGAQVRDA LKWSGYLQDT IEMWGGDVKV KFQSHHWPIW GNADIVEYFK 360
  361 KQRDIYKYTH DQTVRLMNQG YTGEEISEII TLPKSLENNW NTRGYYGTLR HNSRAVYQRY 420
  421 MGWYDGNPSD LNNLPPTDAA VKYVEYMGGE KAAIDKAQAD FDKGNYRWVA EVLKHVVFAN 480
  481 PQSQQGKALL ADAYEQLGYQ SESGPWRSVY LQGAYELRNG APSAGGVQTA SPDIIKNMPP 540
  541 EMLFDYLAVR ILPEKAEGKN FAINLNFTDL NEKYTLYLED SVLIHTKKQS DKPNVTLTLK 600
  601 KSVLDDVQLG NITLEKAIAN GDIQLNGDKE VFKDFVGMLD NFNFWFNIVT P

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle