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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113884077, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.91
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPLSLSRSS LTGRLMLAFG VLGVLLLLLV SLGSLSLHWL KQADSYLYEE SLPASQAARQ  60
   61 LVQASNALSD GVTQLGQVED ERQREFIGRK LSLESATMLN SIKVLLTLDV NEDNHLSVLA 120
  121 GQIIEQLTLL GKSVGQRITL GDELQLRARE LSVAAGHASE LLQSELAVVD SAILAKLSQS 180
  181 YPDMAGDKRS GQLLDDVIER ELDVQEQLNR ALKLVHQIAL LSQLFEASEL QSELQLSVPR 240
  241 LLATFASTTP SHPAAQSKPV LGTAIEQASS AVTQPPRGDV GIDLMALTTV SELIRDPGRL 300
  301 KALKAELAIL LHTPKIIKLQ RELSQSLQRQ QRQQQELAEK LYSLNTLVDS ALNQQQQRAE 360
  361 LARSDYLMQL SYARLGLWGT GILMLVIIGV VVYRVIYRGI ALRLNQATEA MSRLSLGDTN 420
  421 VSLDAHGDDE LTAMANAIEA FKRKTAHNLK LQADLRQVAD ELTEHKKALE QTVATRTQEL 480
  481 AEANLRLDAE AKGHAKARIV AEEASQAKSQ FLATMSHEIR TPLNGLLGTL TLLGHSQLPP 540
  541 AQQQMLALSQ YSGTLLQTVL SDILDFSRLE QGNLTNEPRP TDINALLDEV LAIMVAGANL 600
  601 AGLSLRLNRP QLPACIQIDG PKLRQVLFNL IGNGIKFTPE GGVSLNVSVR GDKLAFVVAD 660
  661 TGVGIAPEVR EQLFMPYCVL PNQGRSRGTG LGLAICKQLV ELMDAEGPGI WVKSEPGKGS 720
  721 EFGFELSFTQ CDKALDTQTQ VQKRVNPQRV LVIEDNKVNA MVAQGFLAHL GHSSSLAVSC 780
  781 QQALAHVSGD KAFDAVMLDI QLSDGSGLTL LPQLKALFAN DNVKFAAFTA QMQTEDLSLY 840
  841 REAGFDTVLA KPLSLQTLTE WLGVARVPAS MPALPYESSS QSAQSLQSPN QAESTSQSHQ 900
  901 AETLLDLNQL QQDLEVLGVK AVSDILALYR CSSAEQIERL SALTSVAHFS EGAKLLHALK 960
  961 GSSASMGLKA LTECCQQWEK TLNTTGENVL DSKVVAELTA CWQVSMTALE QWLARQN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle