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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|82404065, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKTIAATAI LLALGLTACS DVPKTEAVPS SSTAEQAKPN QLTQAQLQQF GDTLGVSYRV  60
   61 LTNRPDDSCD KAAAEGRCFV AEIDFVPEVE LKSRDWAIYF SQMRPVQAVE SKEFSITHIK 120
  121 GDLYRIAPTE AFNGFSKGEK KTLRFRGELW QLSETDAMPN YYIVAGDLSP VVIASTQVQQ 180
  181 DPETQMEVRP YVEAYTDMVK QYRRTDADKL APATPAQLFS NNQQVSEDAS LAVNTIIPTP 240
  241 QKVAIHSQDK AVSLTSGIKL DFGSVTNASA AQQSLDSKHL AAALSRLARL GVNESEQGVA 300
  301 VKLNWRQGAE GSYLLDIKAD AIDIAAADAA GFSYALSSLA SLIDVQDLRV NAMTIEDSPR 360
  361 YPFRGMHIDV ARNFHSKALV FDLLDQMAAY KLNKLHLHMA DDEGWRLEID GLPELTDIGS 420
  421 KRCHDLEENT CLLPQLGSGP FADVPVNGFY SKQDYIDIVK YADARQIQVI PSMDMPGHSR 480
  481 AAIKSMEARY RKLVAEGKAE EAKTYLLSDA ADTTVYSSVQ YYNDNTLNVC MESTYLFVDK 540
  541 VIDEIAKLHQ AAGQPLTRYH IGADETAGAW KQSPACLDFV ANNDKGVKSI DDLGAYFIER 600
  601 ISNQLASKGI EAAGWSDGMS HVRPSNMPAK VQSNIWDVIA YKGYEHANQQ VNNGWDVVLS 660
  661 NPEVLYFDFP YEADPKEHGY YWASRATNAH KVFSFMPDNL VANAEQWTDI QNLPFEADDR 720
  721 ARTDEKGKQS GPREQGKAFA GLQGQLWSET IRSDNTVEYM IFPRLLMLAE RAWHQAAWEV 780
  781 PYQYQGALYN QTTGHFTAAM REAQAQSWQQ MANTLGHKEF IKLDKAGIDY RVPTVGAEIR 840
  841 DGKLFANVAY PGLKIEWRQA SGQWQSYQAG QAVTGPVEIR AIAADGKRKG RSLVVN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle