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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113885157, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFLLSNSSK RRAYRWQQGF SILALSSIST FCTMAAPAIS TQATAAKTMA ANPNVAEGEI  60
   61 LPARHNDEQA NKFKPVVYQI FTRLYGNKNT TNKPWGTISE NGVGKFNDID DIALKSIKDL 120
  121 GVTHVWYTGV PHHALIGDYS AIGVSHDDPD VVKGRAGSPY AVKDYYNVNP DLAVYPAKRL 180
  181 QEFQALIERT HKQGLKVIID IVPNHVARNY HSITKPEGVR DFGEDDNQTL EYERHNNFYY 240
  241 VTDKKQSSGF QVPDLPDTLK PLGGESHPLS DGQFEEIPAK WTGNGSRLAK PDMNDWYETV 300
  301 KINYGVRPDG SHDFPALPPR YATLGAEQHY AFWQQHSHEL PNSWIKFNQI AQYWLAMGVD 360
  361 GFRYDMAEMV PVEFWSYLNS HIKHSHPEAF ILAEVYNPAL YRDYIHLGKM DYLYDKVDLY 420
  421 DTLKAIMAGQ KSTAQIAADQ AKVQDIDSHM LHFLENHDEQ RIANAAFLGV LTGNTSTDAV 480
  481 DPRYALPAMV VSATLSTSPT LLYFGQEVGE AATQNLGFGH ASRTSIFDYA GVPAHQRWMN 540
  541 QGKFDGGQST AAEVALRTYY QKLLNLSTGK NAPALLGKYH SLDAANRSAV SAAKASNKAS 600
  601 NKTNNGSATG YDDSTFAFVR FEAHTANSKG QKLIIVSNFS QTQAKLFSLK LPKSLIAQWQ 660
  661 LTDASYPLKD LLEEHTAQLI VERGEGQVQL QLAPLSSAIF ELVH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle