YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82404392, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.65
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISILVSDVI ENNELANLGA PNEKDIMMKL PLVIFASLLS TSAFAATCPS YLGVEVRKLH  60
   61 SDEKINLCEL TQGKPVLLVN TASNCGYTPQ FKALEALHKE YKDKGLVVIG FPSDDFFQEE 120
  121 NDEKDTAKVC YINYGVTFTM LATSPVRGSD ANSVFKYLGD KAGSPKWNFY KYVVSGDGNT 180
  181 VQQFNSKVKP DSAELKQAIE SVL

Type	Start	End	Confidence
Cytoplasmic	1	29	0.48
Transmembrane Helix	30	53	0.56
Non-Cytoplasmic	54	203	0.84