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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|82404445, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPVNNMTKY SLRSWVLVLA LAPTILVGIL LGSYFTINRF YELEDTLIEQ GSNIIEPLAI  60
   61 ASEVGLVGND REATKRLLAA AQLNKSTLVK SIAIFDIQNQ LFVTSHYHKD FEIMRYKEAL 120
  121 SNLHKTEIEH VGDSLILRTP IFATAPPAPG ATINFDIQTD NGELLGYISV IINKERALLE 180
  181 QHRAAVAAFI IVLIGVQLNL LFTFRLVKNV TQPITEMVRV VAKIREGKLD ARLEGNLIGE 240
  241 LDLLKRGINA MAGSLSEYHD EMQQNIDQAT SDLRETLEQI EIQNVELDLA KKRALEASRI 300
  301 KSEFLANMSH ELRTPLNGVI GFARQLVKTP LHSSQVDYIN TIERSATNLL AIINDILDFS 360
  361 KLEAGKMVLE KMPFGLRETL GETITLISGS AQAKGLELVV DIAPNVPDNV NGDAMRVCQI 420
  421 INNLVGNAIK FTDSGSVLVK LELQNQTDEQ VVLRCDVIDT GIGIDDSQQD FLFQAFGQAD 480
  481 SSISRRFGGT GLGLVITKRL VNQMGGQIGF TSAVDKGSNF WFTLPLGLGQ FQIGDSLPLE 540
  541 KLKDKTVLFY EPRVLTHSVI SRQLKQWDTK VTHHQHIPSL LTTLSTTEHQ FDYVLLSCHG 600
  601 FSNPNQLVST LNQAKTKTDC LIVLFDCQEQ EVLSQFIRPN ADVVLSLPVS EHQLARNMLY 660
  661 PPMEYDISPP ASITVPAARQ SLTVLAVDDN FANLKLIDTL LSELVTTVIA VNSGEEAVKQ 720
  721 AKGRTFDLIF MDIQMPGTDG ISATKQIRQG SMNRNTPIIA VTAHAIAEER ELILGCGMDG 780
  781 YLPKPIDEAA LKAEINRWIT RPKFTHFDLH TLNWDLCLTQ ANHKSDLALD MLRMLLDSLP 840
  841 QTVLAIETAL GQDDQDTMLT TIHKLHGASC YCGVPTTQRL CQEIESALKR DARVEDLEPE 900
  901 ILELLDELTK VESAAKQVLS QLSAEITDDQ KNGLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle