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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113884891, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALTTVPSQQ ARSLTHRRNL TRKPIALAIA ASIIGVASLT GCSPSAPNAD TSTPTVTKAT  60
   61 DAQIAPGAPG KAPTWAFSGK TGIGTSYEPY TQGQYQDSIQ NPISRVWFSV AQGILTETMY 120
  121 GLIHNAQLKE LQFVITGNGF VDTEKDNTIS SIEYLDTDAN GRPQSLAYKI INRDVEGKYQ 180
  181 IEKHIFTDPD RDTLMMRVTF TAFEAGITPH LYVNPHIDNA GANDIGRIDH QALIARTADP 240
  241 HSSVMTVKSD IDFTQATTGF VGVSDGLADL GDNGKLDTLY QATSNAENPT QGNIAFTASY 300
  301 PVLQANQALN VNLAIGFGHD ETSSLANANA SLTAGYDKVL SQYNAGWHSY LHSLPAMPDM 360
  361 AQSTTDNGKL LYTSAMVLKA QEDKTYAGAL IASLSNPWGD TVPAVTPSTG YKAVWPRDFY 420
  421 QCAMAFLAMG DTQTPKVAFE YLKKVQVSDK TPGFSGTPGW FLQKTHVDGQ IEWVGVQLDQ 480
  481 TAMPIMLGWK LWQAGVLSQA ELSHWYQEML KAAADFLVSG GEVNLDWNHT QITPPKTQQE 540
  541 RWEEQAGYSP STTAAVIAGL VAASDIAKAV NDSDTSQRYL ATAKTLNQQL EKHLVTTQGL 600
  601 LTDSQGIKAP YYLRLSPNGE PNTAETLAAN NGRAGLDQRQ ILDGGFLELV RYGVRGATDK 660
  661 LINQSLALVD NTELEENLRL KYNFTAKDGS NVPGFRRYGN DGYGEDTLTG ANYAESGSNS 720
  721 DNQRGRVWPF FTGERGHFEL ALASAKGELT GTHAQQTKQQ LINTYVQGME TFANAGLMLP 780
  781 EQAWDGVGNA TRYQYQLGQG TNSATPLAWT HAEYIKLVRS MSDGRVWDNY PIVPEALK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle