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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113886715, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWLKRIVIA LFSLALLGVG AIVAAYFYVL PDLPDVSTLK NVQLQTPLRI YSSDGKLISQ  60
   61 FGEKRRIPLK LEEVPKTLLQ AFLATEDARF YEHGGIDPVG VMRAAIVMLT TGEKKQGAST 120
  121 ITMQVARNFF LTRDKTIIRK VKEIFISYHI EQLLTKDEIL ELYVNRIYLG QRAYGVGAAA 180
  181 QVYFGKNVQD LTLSEMSMIA GLPKAPSTLN PITSPSRALA RRNVVLMRMN EVGYISKAEY 240
  241 QAAVQEPLVA KYHGAEIDLY APYISEMARD YMVQKYGEEE AYTNGYNVYT TISSEQQLLA 300
  301 QQALRNNVYA YDERHGYRGP AAVLWTDTKP DDAQIKAELA KITPVQELQP AAVLSIDGQQ 360
  361 ASVLTAKGET KVIKWDGLKW ARKFITDKRQ GSVPKSASDM LKVGERIWIR DNGQYLQLSQ 420
  421 VPEVASATVA LDPTNGAIRT LVGGYSFSQS QYNRVTQAKR QLGSNIKPFI YAAALEKGFT 480
  481 LATLINNAPI NKPDISQGTA WRPKNSPDIY GGPTRLRVGL AQSINVMSVR AMRHIGLDAA 540
  541 IAELTKFGFD PNDLPRNESL ALGSPSVTPL QVATAFNVFA NGGFLVEPFY IERVEDSFGN 600
  601 VIEKANPTLA CKPNNSSVQP SSDPMSFGEP AAQTDEPVAY CFEQTGRYAP QIISEQTAFL 660
  661 ITEALKSVIW GGGDWSKGTG WQGTAWRAAQ LIKRHDIAGK TGTTNESRDT WFSGFGPTLT 720
  721 STFWVGFDDH GRQLGRTAWN PNGEKDQITG TEAGAKTAGP GWNEFMNNVL KGVPETTAIP 780
  781 PEGIVSVRID LATGKLTRKT DYTSAFEYFI SGTEPKEYIS ESQDENNLFI DAPTDDLFQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle